Mathematica code execution speed testing












4














I am testing the speed of Mathematica's latest version against a VB macro for simple loops to evaluate Pi.



So the VB macro is:



c = 0: n = 1000000: m = n * n

For i = 0 To n

For j = 0 To n

If (i * i + j * j) / m < 1 Then

c = c + 1

End If

Next

Next

Selection.Text = 4 * c / m


I know how to write the corresponding code in Mathematica, but I do not know the intricacies of Mathematica regarding faster program execution. Can you help please by giving me an example of best optimized code for this example?



There are approximately 4 trillion operations in this example and the VB macro takes less than a day to execute...



This program partitions a quarter of a circular area of radius = 1 to smaller squares of area $1/n^2$ then counts them and adds them together. Essentially, a Monte Carlo Method but with randomness removed.



With your help I have created this faster code which uses parallel computing:



arg = Range[ 0, 1000000]; calcCompiled = 
Compile[{i},
Module[{c = 0}, Do[If[(i*i + j*j)/1000000^2 < 1, ++c], {j, 1000000}];
c], CompilationTarget -> "C", RuntimeAttributes -> {Listable},
Parallelization -> True,
RuntimeOptions -> "Speed"];
AbsoluteTiming@N[4 Total[calcCompiled[arg]]/1000000^2, 20]


Any suggestions how to make this faster are welcome....










share|improve this question




















  • 1




    There is a buildt in benchmark function in Wolfram, see reference.wolfram.com/language/Benchmarking/ref/Benchmark.html. An alternative comparison would be to do the same calculations in VB.
    – FredrikD
    2 days ago










  • "Now I know how to write the corresponding code in Mathematica" ... so include your Mathematica code in the question. Copy and paste in Raw InputForm and format as a code block.
    – Bob Hanlon
    2 days ago










  • Ok Bob, sorry my mistake, I've been writing code for Mathematica since 2002 and Mathematica 4, what do you think? Mathematica 4 was waayyyyy slower then....
    – dimachaerus
    2 days ago












  • Erm. The result of the code seems to be c=1 and that takes an unmeasurable small amount of time to execute. That is eactly one integer operation. But I am not fluent in Visual Basic, so I could be wrong. In total, I do not understand your request.
    – Henrik Schumacher
    2 days ago








  • 2




    @dimachaerus one issue with these kinds of comparisons is you're comparing apples to oranges. Procedural, loop-based code is not the kind of code that is fast in Mathematica (in the absence of Compile). Try a functional algorithm instead. But if VB compiles to low-level C anyway, this might still not quite be the right comparison. Speed tests are tricky if you need to get a truly meaningful result.
    – b3m2a1
    2 days ago
















4














I am testing the speed of Mathematica's latest version against a VB macro for simple loops to evaluate Pi.



So the VB macro is:



c = 0: n = 1000000: m = n * n

For i = 0 To n

For j = 0 To n

If (i * i + j * j) / m < 1 Then

c = c + 1

End If

Next

Next

Selection.Text = 4 * c / m


I know how to write the corresponding code in Mathematica, but I do not know the intricacies of Mathematica regarding faster program execution. Can you help please by giving me an example of best optimized code for this example?



There are approximately 4 trillion operations in this example and the VB macro takes less than a day to execute...



This program partitions a quarter of a circular area of radius = 1 to smaller squares of area $1/n^2$ then counts them and adds them together. Essentially, a Monte Carlo Method but with randomness removed.



With your help I have created this faster code which uses parallel computing:



arg = Range[ 0, 1000000]; calcCompiled = 
Compile[{i},
Module[{c = 0}, Do[If[(i*i + j*j)/1000000^2 < 1, ++c], {j, 1000000}];
c], CompilationTarget -> "C", RuntimeAttributes -> {Listable},
Parallelization -> True,
RuntimeOptions -> "Speed"];
AbsoluteTiming@N[4 Total[calcCompiled[arg]]/1000000^2, 20]


Any suggestions how to make this faster are welcome....










share|improve this question




















  • 1




    There is a buildt in benchmark function in Wolfram, see reference.wolfram.com/language/Benchmarking/ref/Benchmark.html. An alternative comparison would be to do the same calculations in VB.
    – FredrikD
    2 days ago










  • "Now I know how to write the corresponding code in Mathematica" ... so include your Mathematica code in the question. Copy and paste in Raw InputForm and format as a code block.
    – Bob Hanlon
    2 days ago










  • Ok Bob, sorry my mistake, I've been writing code for Mathematica since 2002 and Mathematica 4, what do you think? Mathematica 4 was waayyyyy slower then....
    – dimachaerus
    2 days ago












  • Erm. The result of the code seems to be c=1 and that takes an unmeasurable small amount of time to execute. That is eactly one integer operation. But I am not fluent in Visual Basic, so I could be wrong. In total, I do not understand your request.
    – Henrik Schumacher
    2 days ago








  • 2




    @dimachaerus one issue with these kinds of comparisons is you're comparing apples to oranges. Procedural, loop-based code is not the kind of code that is fast in Mathematica (in the absence of Compile). Try a functional algorithm instead. But if VB compiles to low-level C anyway, this might still not quite be the right comparison. Speed tests are tricky if you need to get a truly meaningful result.
    – b3m2a1
    2 days ago














4












4








4







I am testing the speed of Mathematica's latest version against a VB macro for simple loops to evaluate Pi.



So the VB macro is:



c = 0: n = 1000000: m = n * n

For i = 0 To n

For j = 0 To n

If (i * i + j * j) / m < 1 Then

c = c + 1

End If

Next

Next

Selection.Text = 4 * c / m


I know how to write the corresponding code in Mathematica, but I do not know the intricacies of Mathematica regarding faster program execution. Can you help please by giving me an example of best optimized code for this example?



There are approximately 4 trillion operations in this example and the VB macro takes less than a day to execute...



This program partitions a quarter of a circular area of radius = 1 to smaller squares of area $1/n^2$ then counts them and adds them together. Essentially, a Monte Carlo Method but with randomness removed.



With your help I have created this faster code which uses parallel computing:



arg = Range[ 0, 1000000]; calcCompiled = 
Compile[{i},
Module[{c = 0}, Do[If[(i*i + j*j)/1000000^2 < 1, ++c], {j, 1000000}];
c], CompilationTarget -> "C", RuntimeAttributes -> {Listable},
Parallelization -> True,
RuntimeOptions -> "Speed"];
AbsoluteTiming@N[4 Total[calcCompiled[arg]]/1000000^2, 20]


Any suggestions how to make this faster are welcome....










share|improve this question















I am testing the speed of Mathematica's latest version against a VB macro for simple loops to evaluate Pi.



So the VB macro is:



c = 0: n = 1000000: m = n * n

For i = 0 To n

For j = 0 To n

If (i * i + j * j) / m < 1 Then

c = c + 1

End If

Next

Next

Selection.Text = 4 * c / m


I know how to write the corresponding code in Mathematica, but I do not know the intricacies of Mathematica regarding faster program execution. Can you help please by giving me an example of best optimized code for this example?



There are approximately 4 trillion operations in this example and the VB macro takes less than a day to execute...



This program partitions a quarter of a circular area of radius = 1 to smaller squares of area $1/n^2$ then counts them and adds them together. Essentially, a Monte Carlo Method but with randomness removed.



With your help I have created this faster code which uses parallel computing:



arg = Range[ 0, 1000000]; calcCompiled = 
Compile[{i},
Module[{c = 0}, Do[If[(i*i + j*j)/1000000^2 < 1, ++c], {j, 1000000}];
c], CompilationTarget -> "C", RuntimeAttributes -> {Listable},
Parallelization -> True,
RuntimeOptions -> "Speed"];
AbsoluteTiming@N[4 Total[calcCompiled[arg]]/1000000^2, 20]


Any suggestions how to make this faster are welcome....







performance-tuning






share|improve this question















share|improve this question













share|improve this question




share|improve this question








edited yesterday

























asked 2 days ago









dimachaerus

275




275








  • 1




    There is a buildt in benchmark function in Wolfram, see reference.wolfram.com/language/Benchmarking/ref/Benchmark.html. An alternative comparison would be to do the same calculations in VB.
    – FredrikD
    2 days ago










  • "Now I know how to write the corresponding code in Mathematica" ... so include your Mathematica code in the question. Copy and paste in Raw InputForm and format as a code block.
    – Bob Hanlon
    2 days ago










  • Ok Bob, sorry my mistake, I've been writing code for Mathematica since 2002 and Mathematica 4, what do you think? Mathematica 4 was waayyyyy slower then....
    – dimachaerus
    2 days ago












  • Erm. The result of the code seems to be c=1 and that takes an unmeasurable small amount of time to execute. That is eactly one integer operation. But I am not fluent in Visual Basic, so I could be wrong. In total, I do not understand your request.
    – Henrik Schumacher
    2 days ago








  • 2




    @dimachaerus one issue with these kinds of comparisons is you're comparing apples to oranges. Procedural, loop-based code is not the kind of code that is fast in Mathematica (in the absence of Compile). Try a functional algorithm instead. But if VB compiles to low-level C anyway, this might still not quite be the right comparison. Speed tests are tricky if you need to get a truly meaningful result.
    – b3m2a1
    2 days ago














  • 1




    There is a buildt in benchmark function in Wolfram, see reference.wolfram.com/language/Benchmarking/ref/Benchmark.html. An alternative comparison would be to do the same calculations in VB.
    – FredrikD
    2 days ago










  • "Now I know how to write the corresponding code in Mathematica" ... so include your Mathematica code in the question. Copy and paste in Raw InputForm and format as a code block.
    – Bob Hanlon
    2 days ago










  • Ok Bob, sorry my mistake, I've been writing code for Mathematica since 2002 and Mathematica 4, what do you think? Mathematica 4 was waayyyyy slower then....
    – dimachaerus
    2 days ago












  • Erm. The result of the code seems to be c=1 and that takes an unmeasurable small amount of time to execute. That is eactly one integer operation. But I am not fluent in Visual Basic, so I could be wrong. In total, I do not understand your request.
    – Henrik Schumacher
    2 days ago








  • 2




    @dimachaerus one issue with these kinds of comparisons is you're comparing apples to oranges. Procedural, loop-based code is not the kind of code that is fast in Mathematica (in the absence of Compile). Try a functional algorithm instead. But if VB compiles to low-level C anyway, this might still not quite be the right comparison. Speed tests are tricky if you need to get a truly meaningful result.
    – b3m2a1
    2 days ago








1




1




There is a buildt in benchmark function in Wolfram, see reference.wolfram.com/language/Benchmarking/ref/Benchmark.html. An alternative comparison would be to do the same calculations in VB.
– FredrikD
2 days ago




There is a buildt in benchmark function in Wolfram, see reference.wolfram.com/language/Benchmarking/ref/Benchmark.html. An alternative comparison would be to do the same calculations in VB.
– FredrikD
2 days ago












"Now I know how to write the corresponding code in Mathematica" ... so include your Mathematica code in the question. Copy and paste in Raw InputForm and format as a code block.
– Bob Hanlon
2 days ago




"Now I know how to write the corresponding code in Mathematica" ... so include your Mathematica code in the question. Copy and paste in Raw InputForm and format as a code block.
– Bob Hanlon
2 days ago












Ok Bob, sorry my mistake, I've been writing code for Mathematica since 2002 and Mathematica 4, what do you think? Mathematica 4 was waayyyyy slower then....
– dimachaerus
2 days ago






Ok Bob, sorry my mistake, I've been writing code for Mathematica since 2002 and Mathematica 4, what do you think? Mathematica 4 was waayyyyy slower then....
– dimachaerus
2 days ago














Erm. The result of the code seems to be c=1 and that takes an unmeasurable small amount of time to execute. That is eactly one integer operation. But I am not fluent in Visual Basic, so I could be wrong. In total, I do not understand your request.
– Henrik Schumacher
2 days ago






Erm. The result of the code seems to be c=1 and that takes an unmeasurable small amount of time to execute. That is eactly one integer operation. But I am not fluent in Visual Basic, so I could be wrong. In total, I do not understand your request.
– Henrik Schumacher
2 days ago






2




2




@dimachaerus one issue with these kinds of comparisons is you're comparing apples to oranges. Procedural, loop-based code is not the kind of code that is fast in Mathematica (in the absence of Compile). Try a functional algorithm instead. But if VB compiles to low-level C anyway, this might still not quite be the right comparison. Speed tests are tricky if you need to get a truly meaningful result.
– b3m2a1
2 days ago




@dimachaerus one issue with these kinds of comparisons is you're comparing apples to oranges. Procedural, loop-based code is not the kind of code that is fast in Mathematica (in the absence of Compile). Try a functional algorithm instead. But if VB compiles to low-level C anyway, this might still not quite be the right comparison. Speed tests are tricky if you need to get a truly meaningful result.
– b3m2a1
2 days ago










3 Answers
3






active

oldest

votes


















8














You're comparing a compiled language with an interpreted one. Or, at least, you are using the Wolfram language in interpreted mode. You'll have better results if you use a Compiled function.



Example without Compile — directly translated code:



calcNaive = Function[{n},
Module[{c = 0., m = N[n^2]},
Do[
Do[
If[(i*i + j*j)/m < 1.,
++c
]
, {i, 0., n}]
, {j, 0., n}];
4. c/m]];
AbsoluteTiming@calcNaive[10000]



{264.352184, 3.14199016}




First value in the output is timing in seconds, second is the function return value.



Note here the N[n^2] instead of simple n^2. This way we avoid using arbitrary-length integers in further code, which would result in a 17% longer computation for no real benefit. In general, if you don't need advanced precision, you'd better enter all your numbers as machine-precision numbers, e.g. 1000.0 instead of 1000.



Now the code using Compile (which always uses machine-precision numbers, in addition to C-language-compiler optimizations):



calcCompiled = Compile[{n},
Module[{c = 0, m = n^2},
Do[
Do[
If[(i*i + j*j)/m < 1,
++c
]
, {i, 0, n}]
, {j, 0, n}];
4 c/m]
, CompilationTarget -> "C"
, RuntimeOptions -> "Speed"];
AbsoluteTiming@calcCompiled[10000]



{0.918117, 3.14199016}




Notice more than two orders of magnitude faster calculation.






share|improve this answer























  • Thanks. The right answer I was looking for.
    – dimachaerus
    2 days ago



















10














This is an algorithm of complexity $O(n)$ instead of $O(n^2)$. It runs through in about 8 milliseconds.



n = 1000000;
piapprox =
Total[Floor[
Sqrt[Ramp[Subtract[N[n^2] - 1., Range[1., n]^2]]]]] (4./n^2); //
RepeatedTiming // First

piapprox - Pi



0.00812



-4.00401*10^-6




Moreover, you get more bang for your bucks with the trapezoidal rule as follows:



n = 1000000;
weights = ConstantArray[1./n, n + 1];
weights[[{1, -1}]] = 0.5/n;
piapprox2 = 4. (weights.Sqrt[1. - Subdivide[0., 1., n]^2]);
piapprox2 - Pi



-1.17598*10^-9




And this computes Pi with 16-digit precision by approximating the intersection of the unit disk with the first quadrant by $2^k$ congruent triangles; the area of a single triangle is computed (one half of the result of Det) and multiplied by $4, 2^k$.



RepeatedTiming[
iters = 25;
{p, q} = N[IdentityMatrix[2]];
piapprox = 2^(k + 1) Det[{p, Nest[x [Function] Normalize[p + x], q, iters]}];
][[1]]
piapprox - Pi



0.000048



4.44089*10^-16




This uncompiled versions needs about 0.04 milliseconds.






share|improve this answer























  • Sorry, I am not looking for fast methods to evaluate Pi. I am testing the speed of Mathematica for the particular loop example against Visual Basic and I am finding Mathematica to be very slow compared.
    – dimachaerus
    2 days ago






  • 1




    It is slower in Mathematica because you did it the wrong way. For is well-known to be very slow when not compiled. Try Do instead.
    – Henrik Schumacher
    2 days ago










  • No, even simple: Do[ i * i + j * j, {i, 0, 10000}, {j, 0, 10000}] takes more time than VB.
    – dimachaerus
    2 days ago












  • Then Compile it as it was shown by b3m2a1.
    – Henrik Schumacher
    yesterday



















6














Here's another comparison. First let's look at the raw, inefficient version that someone who comes to Mathematica from another language might try:



badForMathematica[n_] :=
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
]

badForMathematica[1000] // AbsoluteTiming

{3.07878, 3.14552}


Eeesh. But this is the dumb way. Here's a new approach. First we take the your algorithm and realize you're just subdividing and counting hits inside the circle. We can do this much faster using vectorized operations. Here's a way to get all the hits:



countHits[{i1_, i2_}, {j1_, j2_}, m_] :=

With[{r1 = Range[i1, i2]^2, r2 = Range[j1, j2]^2},
Total@UnitStep[m - Join @@ Outer[Plus, r1, r2]]
];


We generate the Outer product you're really generating, then totaling the counts. Simple as that. Now we cook this into a larger algorithm where we work in chunks because I don't have enough memory to work all at once:



goodForMathematica[n_, chunkSize_: 1000] :=
Module[{m, c = 0, chunks},
m = n^2;
chunks =
If[chunkSize >= n,
{{0, n}},
If[#[[-1]] =!= n,
Append[#, n],
#
] &@Range[0, n, chunkSize]
];
Do[c += countHits[c1, c2, m], {c1, chunks}, {c2, chunks}];
(4.*c)/m
]


If you have lots of memory just do it straight out (but you probably don't have enough). Here's that test:



goodForMathematica[10000] // AbsoluteTiming

{3.37823, 3.14199}


We increased the count by an order of magnitude but had similar performance. Note that this algorithm has trash scaling, so we can expect that n = 20000 will take ~12s because we've got four blocks to work with:



1000000 will therefore take about ~35000s or ~10 hours. Not gonna actually do it.



Finally, here's probably the first thing to think of, which is to just use Compile:



compiledVersion =
Compile[{{n, _Integer}},
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
],
RuntimeOptions -> "Speed",
CompilationTarget -> "C"
];

compiledVersion[100000] // AbsoluteTiming

{14.8691, 3.14163}


And this blows everything else out of the water (notice I use 100000 per grid subdivision), but that makes sense, because we're really using C, not Mathematica.






share|improve this answer





















  • There's no need to put i and j into Module: Do already localizes their names.
    – Ruslan
    2 days ago










  • @Ruslan ah yeah at first I was just directly copying the OPs For structure but then got annoyed with it. I'll prune it sometime later.
    – b3m2a1
    2 days ago










  • Excellent answer! I noticed that the "i" outer loop can be further subdivided into n separate smaller loops to utilize the n different cores of my processor and kernels of Mathematica 11.3 for parallel processing. Any idea how to optimize code for this task?
    – dimachaerus
    2 days ago













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3 Answers
3






active

oldest

votes








3 Answers
3






active

oldest

votes









active

oldest

votes






active

oldest

votes









8














You're comparing a compiled language with an interpreted one. Or, at least, you are using the Wolfram language in interpreted mode. You'll have better results if you use a Compiled function.



Example without Compile — directly translated code:



calcNaive = Function[{n},
Module[{c = 0., m = N[n^2]},
Do[
Do[
If[(i*i + j*j)/m < 1.,
++c
]
, {i, 0., n}]
, {j, 0., n}];
4. c/m]];
AbsoluteTiming@calcNaive[10000]



{264.352184, 3.14199016}




First value in the output is timing in seconds, second is the function return value.



Note here the N[n^2] instead of simple n^2. This way we avoid using arbitrary-length integers in further code, which would result in a 17% longer computation for no real benefit. In general, if you don't need advanced precision, you'd better enter all your numbers as machine-precision numbers, e.g. 1000.0 instead of 1000.



Now the code using Compile (which always uses machine-precision numbers, in addition to C-language-compiler optimizations):



calcCompiled = Compile[{n},
Module[{c = 0, m = n^2},
Do[
Do[
If[(i*i + j*j)/m < 1,
++c
]
, {i, 0, n}]
, {j, 0, n}];
4 c/m]
, CompilationTarget -> "C"
, RuntimeOptions -> "Speed"];
AbsoluteTiming@calcCompiled[10000]



{0.918117, 3.14199016}




Notice more than two orders of magnitude faster calculation.






share|improve this answer























  • Thanks. The right answer I was looking for.
    – dimachaerus
    2 days ago
















8














You're comparing a compiled language with an interpreted one. Or, at least, you are using the Wolfram language in interpreted mode. You'll have better results if you use a Compiled function.



Example without Compile — directly translated code:



calcNaive = Function[{n},
Module[{c = 0., m = N[n^2]},
Do[
Do[
If[(i*i + j*j)/m < 1.,
++c
]
, {i, 0., n}]
, {j, 0., n}];
4. c/m]];
AbsoluteTiming@calcNaive[10000]



{264.352184, 3.14199016}




First value in the output is timing in seconds, second is the function return value.



Note here the N[n^2] instead of simple n^2. This way we avoid using arbitrary-length integers in further code, which would result in a 17% longer computation for no real benefit. In general, if you don't need advanced precision, you'd better enter all your numbers as machine-precision numbers, e.g. 1000.0 instead of 1000.



Now the code using Compile (which always uses machine-precision numbers, in addition to C-language-compiler optimizations):



calcCompiled = Compile[{n},
Module[{c = 0, m = n^2},
Do[
Do[
If[(i*i + j*j)/m < 1,
++c
]
, {i, 0, n}]
, {j, 0, n}];
4 c/m]
, CompilationTarget -> "C"
, RuntimeOptions -> "Speed"];
AbsoluteTiming@calcCompiled[10000]



{0.918117, 3.14199016}




Notice more than two orders of magnitude faster calculation.






share|improve this answer























  • Thanks. The right answer I was looking for.
    – dimachaerus
    2 days ago














8












8








8






You're comparing a compiled language with an interpreted one. Or, at least, you are using the Wolfram language in interpreted mode. You'll have better results if you use a Compiled function.



Example without Compile — directly translated code:



calcNaive = Function[{n},
Module[{c = 0., m = N[n^2]},
Do[
Do[
If[(i*i + j*j)/m < 1.,
++c
]
, {i, 0., n}]
, {j, 0., n}];
4. c/m]];
AbsoluteTiming@calcNaive[10000]



{264.352184, 3.14199016}




First value in the output is timing in seconds, second is the function return value.



Note here the N[n^2] instead of simple n^2. This way we avoid using arbitrary-length integers in further code, which would result in a 17% longer computation for no real benefit. In general, if you don't need advanced precision, you'd better enter all your numbers as machine-precision numbers, e.g. 1000.0 instead of 1000.



Now the code using Compile (which always uses machine-precision numbers, in addition to C-language-compiler optimizations):



calcCompiled = Compile[{n},
Module[{c = 0, m = n^2},
Do[
Do[
If[(i*i + j*j)/m < 1,
++c
]
, {i, 0, n}]
, {j, 0, n}];
4 c/m]
, CompilationTarget -> "C"
, RuntimeOptions -> "Speed"];
AbsoluteTiming@calcCompiled[10000]



{0.918117, 3.14199016}




Notice more than two orders of magnitude faster calculation.






share|improve this answer














You're comparing a compiled language with an interpreted one. Or, at least, you are using the Wolfram language in interpreted mode. You'll have better results if you use a Compiled function.



Example without Compile — directly translated code:



calcNaive = Function[{n},
Module[{c = 0., m = N[n^2]},
Do[
Do[
If[(i*i + j*j)/m < 1.,
++c
]
, {i, 0., n}]
, {j, 0., n}];
4. c/m]];
AbsoluteTiming@calcNaive[10000]



{264.352184, 3.14199016}




First value in the output is timing in seconds, second is the function return value.



Note here the N[n^2] instead of simple n^2. This way we avoid using arbitrary-length integers in further code, which would result in a 17% longer computation for no real benefit. In general, if you don't need advanced precision, you'd better enter all your numbers as machine-precision numbers, e.g. 1000.0 instead of 1000.



Now the code using Compile (which always uses machine-precision numbers, in addition to C-language-compiler optimizations):



calcCompiled = Compile[{n},
Module[{c = 0, m = n^2},
Do[
Do[
If[(i*i + j*j)/m < 1,
++c
]
, {i, 0, n}]
, {j, 0, n}];
4 c/m]
, CompilationTarget -> "C"
, RuntimeOptions -> "Speed"];
AbsoluteTiming@calcCompiled[10000]



{0.918117, 3.14199016}




Notice more than two orders of magnitude faster calculation.







share|improve this answer














share|improve this answer



share|improve this answer








edited 2 days ago

























answered 2 days ago









Ruslan

3,29911242




3,29911242












  • Thanks. The right answer I was looking for.
    – dimachaerus
    2 days ago


















  • Thanks. The right answer I was looking for.
    – dimachaerus
    2 days ago
















Thanks. The right answer I was looking for.
– dimachaerus
2 days ago




Thanks. The right answer I was looking for.
– dimachaerus
2 days ago











10














This is an algorithm of complexity $O(n)$ instead of $O(n^2)$. It runs through in about 8 milliseconds.



n = 1000000;
piapprox =
Total[Floor[
Sqrt[Ramp[Subtract[N[n^2] - 1., Range[1., n]^2]]]]] (4./n^2); //
RepeatedTiming // First

piapprox - Pi



0.00812



-4.00401*10^-6




Moreover, you get more bang for your bucks with the trapezoidal rule as follows:



n = 1000000;
weights = ConstantArray[1./n, n + 1];
weights[[{1, -1}]] = 0.5/n;
piapprox2 = 4. (weights.Sqrt[1. - Subdivide[0., 1., n]^2]);
piapprox2 - Pi



-1.17598*10^-9




And this computes Pi with 16-digit precision by approximating the intersection of the unit disk with the first quadrant by $2^k$ congruent triangles; the area of a single triangle is computed (one half of the result of Det) and multiplied by $4, 2^k$.



RepeatedTiming[
iters = 25;
{p, q} = N[IdentityMatrix[2]];
piapprox = 2^(k + 1) Det[{p, Nest[x [Function] Normalize[p + x], q, iters]}];
][[1]]
piapprox - Pi



0.000048



4.44089*10^-16




This uncompiled versions needs about 0.04 milliseconds.






share|improve this answer























  • Sorry, I am not looking for fast methods to evaluate Pi. I am testing the speed of Mathematica for the particular loop example against Visual Basic and I am finding Mathematica to be very slow compared.
    – dimachaerus
    2 days ago






  • 1




    It is slower in Mathematica because you did it the wrong way. For is well-known to be very slow when not compiled. Try Do instead.
    – Henrik Schumacher
    2 days ago










  • No, even simple: Do[ i * i + j * j, {i, 0, 10000}, {j, 0, 10000}] takes more time than VB.
    – dimachaerus
    2 days ago












  • Then Compile it as it was shown by b3m2a1.
    – Henrik Schumacher
    yesterday
















10














This is an algorithm of complexity $O(n)$ instead of $O(n^2)$. It runs through in about 8 milliseconds.



n = 1000000;
piapprox =
Total[Floor[
Sqrt[Ramp[Subtract[N[n^2] - 1., Range[1., n]^2]]]]] (4./n^2); //
RepeatedTiming // First

piapprox - Pi



0.00812



-4.00401*10^-6




Moreover, you get more bang for your bucks with the trapezoidal rule as follows:



n = 1000000;
weights = ConstantArray[1./n, n + 1];
weights[[{1, -1}]] = 0.5/n;
piapprox2 = 4. (weights.Sqrt[1. - Subdivide[0., 1., n]^2]);
piapprox2 - Pi



-1.17598*10^-9




And this computes Pi with 16-digit precision by approximating the intersection of the unit disk with the first quadrant by $2^k$ congruent triangles; the area of a single triangle is computed (one half of the result of Det) and multiplied by $4, 2^k$.



RepeatedTiming[
iters = 25;
{p, q} = N[IdentityMatrix[2]];
piapprox = 2^(k + 1) Det[{p, Nest[x [Function] Normalize[p + x], q, iters]}];
][[1]]
piapprox - Pi



0.000048



4.44089*10^-16




This uncompiled versions needs about 0.04 milliseconds.






share|improve this answer























  • Sorry, I am not looking for fast methods to evaluate Pi. I am testing the speed of Mathematica for the particular loop example against Visual Basic and I am finding Mathematica to be very slow compared.
    – dimachaerus
    2 days ago






  • 1




    It is slower in Mathematica because you did it the wrong way. For is well-known to be very slow when not compiled. Try Do instead.
    – Henrik Schumacher
    2 days ago










  • No, even simple: Do[ i * i + j * j, {i, 0, 10000}, {j, 0, 10000}] takes more time than VB.
    – dimachaerus
    2 days ago












  • Then Compile it as it was shown by b3m2a1.
    – Henrik Schumacher
    yesterday














10












10








10






This is an algorithm of complexity $O(n)$ instead of $O(n^2)$. It runs through in about 8 milliseconds.



n = 1000000;
piapprox =
Total[Floor[
Sqrt[Ramp[Subtract[N[n^2] - 1., Range[1., n]^2]]]]] (4./n^2); //
RepeatedTiming // First

piapprox - Pi



0.00812



-4.00401*10^-6




Moreover, you get more bang for your bucks with the trapezoidal rule as follows:



n = 1000000;
weights = ConstantArray[1./n, n + 1];
weights[[{1, -1}]] = 0.5/n;
piapprox2 = 4. (weights.Sqrt[1. - Subdivide[0., 1., n]^2]);
piapprox2 - Pi



-1.17598*10^-9




And this computes Pi with 16-digit precision by approximating the intersection of the unit disk with the first quadrant by $2^k$ congruent triangles; the area of a single triangle is computed (one half of the result of Det) and multiplied by $4, 2^k$.



RepeatedTiming[
iters = 25;
{p, q} = N[IdentityMatrix[2]];
piapprox = 2^(k + 1) Det[{p, Nest[x [Function] Normalize[p + x], q, iters]}];
][[1]]
piapprox - Pi



0.000048



4.44089*10^-16




This uncompiled versions needs about 0.04 milliseconds.






share|improve this answer














This is an algorithm of complexity $O(n)$ instead of $O(n^2)$. It runs through in about 8 milliseconds.



n = 1000000;
piapprox =
Total[Floor[
Sqrt[Ramp[Subtract[N[n^2] - 1., Range[1., n]^2]]]]] (4./n^2); //
RepeatedTiming // First

piapprox - Pi



0.00812



-4.00401*10^-6




Moreover, you get more bang for your bucks with the trapezoidal rule as follows:



n = 1000000;
weights = ConstantArray[1./n, n + 1];
weights[[{1, -1}]] = 0.5/n;
piapprox2 = 4. (weights.Sqrt[1. - Subdivide[0., 1., n]^2]);
piapprox2 - Pi



-1.17598*10^-9




And this computes Pi with 16-digit precision by approximating the intersection of the unit disk with the first quadrant by $2^k$ congruent triangles; the area of a single triangle is computed (one half of the result of Det) and multiplied by $4, 2^k$.



RepeatedTiming[
iters = 25;
{p, q} = N[IdentityMatrix[2]];
piapprox = 2^(k + 1) Det[{p, Nest[x [Function] Normalize[p + x], q, iters]}];
][[1]]
piapprox - Pi



0.000048



4.44089*10^-16




This uncompiled versions needs about 0.04 milliseconds.







share|improve this answer














share|improve this answer



share|improve this answer








edited 2 days ago

























answered 2 days ago









Henrik Schumacher

48.6k467139




48.6k467139












  • Sorry, I am not looking for fast methods to evaluate Pi. I am testing the speed of Mathematica for the particular loop example against Visual Basic and I am finding Mathematica to be very slow compared.
    – dimachaerus
    2 days ago






  • 1




    It is slower in Mathematica because you did it the wrong way. For is well-known to be very slow when not compiled. Try Do instead.
    – Henrik Schumacher
    2 days ago










  • No, even simple: Do[ i * i + j * j, {i, 0, 10000}, {j, 0, 10000}] takes more time than VB.
    – dimachaerus
    2 days ago












  • Then Compile it as it was shown by b3m2a1.
    – Henrik Schumacher
    yesterday


















  • Sorry, I am not looking for fast methods to evaluate Pi. I am testing the speed of Mathematica for the particular loop example against Visual Basic and I am finding Mathematica to be very slow compared.
    – dimachaerus
    2 days ago






  • 1




    It is slower in Mathematica because you did it the wrong way. For is well-known to be very slow when not compiled. Try Do instead.
    – Henrik Schumacher
    2 days ago










  • No, even simple: Do[ i * i + j * j, {i, 0, 10000}, {j, 0, 10000}] takes more time than VB.
    – dimachaerus
    2 days ago












  • Then Compile it as it was shown by b3m2a1.
    – Henrik Schumacher
    yesterday
















Sorry, I am not looking for fast methods to evaluate Pi. I am testing the speed of Mathematica for the particular loop example against Visual Basic and I am finding Mathematica to be very slow compared.
– dimachaerus
2 days ago




Sorry, I am not looking for fast methods to evaluate Pi. I am testing the speed of Mathematica for the particular loop example against Visual Basic and I am finding Mathematica to be very slow compared.
– dimachaerus
2 days ago




1




1




It is slower in Mathematica because you did it the wrong way. For is well-known to be very slow when not compiled. Try Do instead.
– Henrik Schumacher
2 days ago




It is slower in Mathematica because you did it the wrong way. For is well-known to be very slow when not compiled. Try Do instead.
– Henrik Schumacher
2 days ago












No, even simple: Do[ i * i + j * j, {i, 0, 10000}, {j, 0, 10000}] takes more time than VB.
– dimachaerus
2 days ago






No, even simple: Do[ i * i + j * j, {i, 0, 10000}, {j, 0, 10000}] takes more time than VB.
– dimachaerus
2 days ago














Then Compile it as it was shown by b3m2a1.
– Henrik Schumacher
yesterday




Then Compile it as it was shown by b3m2a1.
– Henrik Schumacher
yesterday











6














Here's another comparison. First let's look at the raw, inefficient version that someone who comes to Mathematica from another language might try:



badForMathematica[n_] :=
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
]

badForMathematica[1000] // AbsoluteTiming

{3.07878, 3.14552}


Eeesh. But this is the dumb way. Here's a new approach. First we take the your algorithm and realize you're just subdividing and counting hits inside the circle. We can do this much faster using vectorized operations. Here's a way to get all the hits:



countHits[{i1_, i2_}, {j1_, j2_}, m_] :=

With[{r1 = Range[i1, i2]^2, r2 = Range[j1, j2]^2},
Total@UnitStep[m - Join @@ Outer[Plus, r1, r2]]
];


We generate the Outer product you're really generating, then totaling the counts. Simple as that. Now we cook this into a larger algorithm where we work in chunks because I don't have enough memory to work all at once:



goodForMathematica[n_, chunkSize_: 1000] :=
Module[{m, c = 0, chunks},
m = n^2;
chunks =
If[chunkSize >= n,
{{0, n}},
If[#[[-1]] =!= n,
Append[#, n],
#
] &@Range[0, n, chunkSize]
];
Do[c += countHits[c1, c2, m], {c1, chunks}, {c2, chunks}];
(4.*c)/m
]


If you have lots of memory just do it straight out (but you probably don't have enough). Here's that test:



goodForMathematica[10000] // AbsoluteTiming

{3.37823, 3.14199}


We increased the count by an order of magnitude but had similar performance. Note that this algorithm has trash scaling, so we can expect that n = 20000 will take ~12s because we've got four blocks to work with:



1000000 will therefore take about ~35000s or ~10 hours. Not gonna actually do it.



Finally, here's probably the first thing to think of, which is to just use Compile:



compiledVersion =
Compile[{{n, _Integer}},
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
],
RuntimeOptions -> "Speed",
CompilationTarget -> "C"
];

compiledVersion[100000] // AbsoluteTiming

{14.8691, 3.14163}


And this blows everything else out of the water (notice I use 100000 per grid subdivision), but that makes sense, because we're really using C, not Mathematica.






share|improve this answer





















  • There's no need to put i and j into Module: Do already localizes their names.
    – Ruslan
    2 days ago










  • @Ruslan ah yeah at first I was just directly copying the OPs For structure but then got annoyed with it. I'll prune it sometime later.
    – b3m2a1
    2 days ago










  • Excellent answer! I noticed that the "i" outer loop can be further subdivided into n separate smaller loops to utilize the n different cores of my processor and kernels of Mathematica 11.3 for parallel processing. Any idea how to optimize code for this task?
    – dimachaerus
    2 days ago


















6














Here's another comparison. First let's look at the raw, inefficient version that someone who comes to Mathematica from another language might try:



badForMathematica[n_] :=
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
]

badForMathematica[1000] // AbsoluteTiming

{3.07878, 3.14552}


Eeesh. But this is the dumb way. Here's a new approach. First we take the your algorithm and realize you're just subdividing and counting hits inside the circle. We can do this much faster using vectorized operations. Here's a way to get all the hits:



countHits[{i1_, i2_}, {j1_, j2_}, m_] :=

With[{r1 = Range[i1, i2]^2, r2 = Range[j1, j2]^2},
Total@UnitStep[m - Join @@ Outer[Plus, r1, r2]]
];


We generate the Outer product you're really generating, then totaling the counts. Simple as that. Now we cook this into a larger algorithm where we work in chunks because I don't have enough memory to work all at once:



goodForMathematica[n_, chunkSize_: 1000] :=
Module[{m, c = 0, chunks},
m = n^2;
chunks =
If[chunkSize >= n,
{{0, n}},
If[#[[-1]] =!= n,
Append[#, n],
#
] &@Range[0, n, chunkSize]
];
Do[c += countHits[c1, c2, m], {c1, chunks}, {c2, chunks}];
(4.*c)/m
]


If you have lots of memory just do it straight out (but you probably don't have enough). Here's that test:



goodForMathematica[10000] // AbsoluteTiming

{3.37823, 3.14199}


We increased the count by an order of magnitude but had similar performance. Note that this algorithm has trash scaling, so we can expect that n = 20000 will take ~12s because we've got four blocks to work with:



1000000 will therefore take about ~35000s or ~10 hours. Not gonna actually do it.



Finally, here's probably the first thing to think of, which is to just use Compile:



compiledVersion =
Compile[{{n, _Integer}},
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
],
RuntimeOptions -> "Speed",
CompilationTarget -> "C"
];

compiledVersion[100000] // AbsoluteTiming

{14.8691, 3.14163}


And this blows everything else out of the water (notice I use 100000 per grid subdivision), but that makes sense, because we're really using C, not Mathematica.






share|improve this answer





















  • There's no need to put i and j into Module: Do already localizes their names.
    – Ruslan
    2 days ago










  • @Ruslan ah yeah at first I was just directly copying the OPs For structure but then got annoyed with it. I'll prune it sometime later.
    – b3m2a1
    2 days ago










  • Excellent answer! I noticed that the "i" outer loop can be further subdivided into n separate smaller loops to utilize the n different cores of my processor and kernels of Mathematica 11.3 for parallel processing. Any idea how to optimize code for this task?
    – dimachaerus
    2 days ago
















6












6








6






Here's another comparison. First let's look at the raw, inefficient version that someone who comes to Mathematica from another language might try:



badForMathematica[n_] :=
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
]

badForMathematica[1000] // AbsoluteTiming

{3.07878, 3.14552}


Eeesh. But this is the dumb way. Here's a new approach. First we take the your algorithm and realize you're just subdividing and counting hits inside the circle. We can do this much faster using vectorized operations. Here's a way to get all the hits:



countHits[{i1_, i2_}, {j1_, j2_}, m_] :=

With[{r1 = Range[i1, i2]^2, r2 = Range[j1, j2]^2},
Total@UnitStep[m - Join @@ Outer[Plus, r1, r2]]
];


We generate the Outer product you're really generating, then totaling the counts. Simple as that. Now we cook this into a larger algorithm where we work in chunks because I don't have enough memory to work all at once:



goodForMathematica[n_, chunkSize_: 1000] :=
Module[{m, c = 0, chunks},
m = n^2;
chunks =
If[chunkSize >= n,
{{0, n}},
If[#[[-1]] =!= n,
Append[#, n],
#
] &@Range[0, n, chunkSize]
];
Do[c += countHits[c1, c2, m], {c1, chunks}, {c2, chunks}];
(4.*c)/m
]


If you have lots of memory just do it straight out (but you probably don't have enough). Here's that test:



goodForMathematica[10000] // AbsoluteTiming

{3.37823, 3.14199}


We increased the count by an order of magnitude but had similar performance. Note that this algorithm has trash scaling, so we can expect that n = 20000 will take ~12s because we've got four blocks to work with:



1000000 will therefore take about ~35000s or ~10 hours. Not gonna actually do it.



Finally, here's probably the first thing to think of, which is to just use Compile:



compiledVersion =
Compile[{{n, _Integer}},
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
],
RuntimeOptions -> "Speed",
CompilationTarget -> "C"
];

compiledVersion[100000] // AbsoluteTiming

{14.8691, 3.14163}


And this blows everything else out of the water (notice I use 100000 per grid subdivision), but that makes sense, because we're really using C, not Mathematica.






share|improve this answer












Here's another comparison. First let's look at the raw, inefficient version that someone who comes to Mathematica from another language might try:



badForMathematica[n_] :=
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
]

badForMathematica[1000] // AbsoluteTiming

{3.07878, 3.14552}


Eeesh. But this is the dumb way. Here's a new approach. First we take the your algorithm and realize you're just subdividing and counting hits inside the circle. We can do this much faster using vectorized operations. Here's a way to get all the hits:



countHits[{i1_, i2_}, {j1_, j2_}, m_] :=

With[{r1 = Range[i1, i2]^2, r2 = Range[j1, j2]^2},
Total@UnitStep[m - Join @@ Outer[Plus, r1, r2]]
];


We generate the Outer product you're really generating, then totaling the counts. Simple as that. Now we cook this into a larger algorithm where we work in chunks because I don't have enough memory to work all at once:



goodForMathematica[n_, chunkSize_: 1000] :=
Module[{m, c = 0, chunks},
m = n^2;
chunks =
If[chunkSize >= n,
{{0, n}},
If[#[[-1]] =!= n,
Append[#, n],
#
] &@Range[0, n, chunkSize]
];
Do[c += countHits[c1, c2, m], {c1, chunks}, {c2, chunks}];
(4.*c)/m
]


If you have lots of memory just do it straight out (but you probably don't have enough). Here's that test:



goodForMathematica[10000] // AbsoluteTiming

{3.37823, 3.14199}


We increased the count by an order of magnitude but had similar performance. Note that this algorithm has trash scaling, so we can expect that n = 20000 will take ~12s because we've got four blocks to work with:



1000000 will therefore take about ~35000s or ~10 hours. Not gonna actually do it.



Finally, here's probably the first thing to think of, which is to just use Compile:



compiledVersion =
Compile[{{n, _Integer}},
Module[{i, j, c = 0., m = n^2},
Do[
If[(i^2 + j^2)/m < 1,
c = c + 1
],
{i, 0, n - 1},
{j, 0, n - 1}
];
(4*c)/m
],
RuntimeOptions -> "Speed",
CompilationTarget -> "C"
];

compiledVersion[100000] // AbsoluteTiming

{14.8691, 3.14163}


And this blows everything else out of the water (notice I use 100000 per grid subdivision), but that makes sense, because we're really using C, not Mathematica.







share|improve this answer












share|improve this answer



share|improve this answer










answered 2 days ago









b3m2a1

26.7k257154




26.7k257154












  • There's no need to put i and j into Module: Do already localizes their names.
    – Ruslan
    2 days ago










  • @Ruslan ah yeah at first I was just directly copying the OPs For structure but then got annoyed with it. I'll prune it sometime later.
    – b3m2a1
    2 days ago










  • Excellent answer! I noticed that the "i" outer loop can be further subdivided into n separate smaller loops to utilize the n different cores of my processor and kernels of Mathematica 11.3 for parallel processing. Any idea how to optimize code for this task?
    – dimachaerus
    2 days ago




















  • There's no need to put i and j into Module: Do already localizes their names.
    – Ruslan
    2 days ago










  • @Ruslan ah yeah at first I was just directly copying the OPs For structure but then got annoyed with it. I'll prune it sometime later.
    – b3m2a1
    2 days ago










  • Excellent answer! I noticed that the "i" outer loop can be further subdivided into n separate smaller loops to utilize the n different cores of my processor and kernels of Mathematica 11.3 for parallel processing. Any idea how to optimize code for this task?
    – dimachaerus
    2 days ago


















There's no need to put i and j into Module: Do already localizes their names.
– Ruslan
2 days ago




There's no need to put i and j into Module: Do already localizes their names.
– Ruslan
2 days ago












@Ruslan ah yeah at first I was just directly copying the OPs For structure but then got annoyed with it. I'll prune it sometime later.
– b3m2a1
2 days ago




@Ruslan ah yeah at first I was just directly copying the OPs For structure but then got annoyed with it. I'll prune it sometime later.
– b3m2a1
2 days ago












Excellent answer! I noticed that the "i" outer loop can be further subdivided into n separate smaller loops to utilize the n different cores of my processor and kernels of Mathematica 11.3 for parallel processing. Any idea how to optimize code for this task?
– dimachaerus
2 days ago






Excellent answer! I noticed that the "i" outer loop can be further subdivided into n separate smaller loops to utilize the n different cores of my processor and kernels of Mathematica 11.3 for parallel processing. Any idea how to optimize code for this task?
– dimachaerus
2 days ago




















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